Multiple sites and sites outside of FarCry root
This is highly useful for hosting multiple FarCry clients with a single FarCry core in a shared hosting environment. Also, this documents how to use virtual directories for multiple environments outside of FarCry's root folder.
Install FarCry
Not much to add here. Just ensure that your virtual mapping "/farcry" exists, as well as the ColdFusion mapping.
Install Mollio
Install Mollio where you desire. You will need to make an Apache/IIS/etc. mapping to "/<appname>" and it's <appname>/www directory. If using subdirectories, also make an Apache/IIS/etc. mapping for "/<appname>/farcry" pointed to <farcryinstall>/farcry_core/admin. Create a new ColdFusion mapping for your project.  This would be called "/farcry/appname" and point to your application root folder.So, let's illustrate this point. You will have a FarCry folder and an application folder. They are:
C:\farcry
C:\myAppOpen the ColdFusion administrator and add a mapping:
"/farcry/myApp" c:\myApp
Apache - Config
Add two new aliases:
Alias /myApp "C:\myApp\www"
Alias /myApp/farcry "C:\farcry\farcry_core\admin"
Add a directory to allow access (note:Â Please adjust security settings for your environment):
<Directory "C:/myApp/www">
   Options Indexes FollowSymLinks
   AllowOverride None
   Order allow,deny
   Allow from all
</Directory>
IIS - Config
Add two virtual directories:
Right click your website->New->Virtual directory
           Alias: myApp
           Home directory: C:\myApp\www
Right click virtual directory myApp->New->Virtual Directory
           Alias: farcry
           Home directory: C:\farcry\farcry_core\admin
Install FarCry - your application
Open a web browser to http://localhost/myApp/install
Fill in the install form:
           Application name: myApp
           Project DSN: Your DSN
           Database Type: Your database type
           Project Web Mapping: /myApp
           FarCry Web Mapping: /myApp/farcry
Additional items
I had to add an application.url.webroot variable to my _serverSpecificVars.cfm
<cfset application.url.webroot = "/myApp"> in order to resolve pages correctly. I think this should be set within FarCry core, but it does not appear to be the case.